Haven't actually had any problems server-wise that I've caught since then. :/

As far as I was able to see, they were just working on their station. Will talk to him next time I see him and try to get some more info.

This may not be related to this bug afer all and may be its own thing as the plate being misaligned is client side and seems to only occasionally happen.

New information:
Almost every time it crashes I have the same section in the logs just before it goes unresponsive, 2 examples below:

This issue seems to be on initial login, It is crashing the starside server whenever someone logs out on a planet then logs back in, the plate is shifted into the planet core and kills the server, although relogging fixes the orientation of the plate.